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Table 4. Protein list of human brain sEVs and lEVs matched to top 100 markers in Exocarta,. Vesiclepedia, and EVpedia. Top

The list merely means that these 100 proteins are most often reported in EV studies and does not warrant them to be called as EV markers or enriched proteins. Vesiclepedia 2019: a compendium of RNA, proteins, lipids and metabolites in extracellular vesicles. November 2018; database pr ovides top 100 pr oteins that are often identied. When we compared the EV proteins with the top 100 marker proteins from ExoCarta and Vesiclepedia, we found that of the 100 markers provided in the two databases, more than 74 proteins were observed in the EVs from 2D and 3D cultured hMSCs, those included CD9, CD63, CD81, Syntenin-1, and Flotillin-1 (Fig. 5G).

Vesiclepedia top 100

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Oct 2, 2019 the top 100 most often published EV markers described in public publicly available extracellular proteome databases ('Vesiclepedia'.

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01/04/2013 - Manuscript describing Vesiclepedia was highlighted in the tool section of Nature Methods. 19/12/2012 - Vesiclepedia published in PLOS Biology The data is free to all. Please cite the article describing Vesiclepedia if you use the data. Vesiclepedia citation: 1, Pathan, M., Fonseka, P., Chitti, S.V., Kang, T However, we emphasise caution when the data from Vesiclepedia is used for EV based analysis.

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We compared the proteome Table 4. Protein list of human brain sEVs and lEVs matched to top 100 markers in Exocarta,.
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Proteins clustered within the Top Networks/Associated Functions as derived from IPA algorithms are shown as members of this interactome, which was entitled “Gene Expression, Cell Cycle, Infectious Disease.” Top 100 proteins ExoCarta_top100_protein_details_5.txt Perform bioinformatics analysis of your extracellular vesicle data set using FunRich , a open access standalone tool. By H. Kalra, R.J. Simpson, H. Ji, E. Aikawa, P. Altevogt, P. Askenase, V.C. Bond, F.E. Borràs, X. Breakefield, V. Budnik, E. Buzas, G. Camussi, A. Clayton, E Furthermore, we constructed a list of the top 100 proteins identified in three online EV databases (EVpedia, ExoCarta and VesiclePedia [87] [88] [89], and when performing a multi-group comparison Seventy-two fractions were collected with a 72 min gradient of mobile phase B (10% ACN, 0.1% FA), at 0% for 5 min, 0–20% B for 25 min, 20–33% B for 10 min, 33–60% B for 10 min and 60–100% Natural killer (NK) cells contribute to immunosurveillance and first-line defense in the control of tumor growth and metastasis diffusion. NK-cell-derived extracellular vesicles (NKEVs) are constitutively secreted and biologically active.

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HBV-replicating cells EVs, 13 were present in the top 100 pro-teins that are often identified in EVs (from Vesiclepedia of EVs proteome). Moreover, of 153 protein

01/04/2013 - Vesiclepedia highlighted in Nature Methods. 01/04/2013 - Manuscript describing Vesiclepedia was highlighted in the tool section of Nature Methods.

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